AP Biology · Unit 2 · Topic 2.6

Through the Channel

An ion cannot cross an oily membrane interior on its own. Add the right protein and the flow starts, still with no energy spent.

Learning objective 2.6.A Explain how the structure of a molecule affects its ability to pass through the plasma membrane.

Watch it work · a two-minute demo for teachers

Narrated walkthrough of the “Find the right door” tab. Captions are on by default.

Every protein has one job

Four embedded proteins, each selective for a different substance. Drag a solute at a protein and see whether that protein will take it. An ion or a sugar cannot cross the interior on its own, so if no protein accepts it, it does not get across at all. Water is the exception: small and polar, a little seeps through the bare bilayer, and an aquaporin makes it fast.

channel protein transport protein accepted turned away positive ion (K⁺, Na⁺) negative ion (Cl⁻) uncharged molecule
Solute—
Its route—
ATP required0
Crossings0
Pick a solute and drag it at a protein.

Still passive, even with a protein

The thing students get wrong

Run the flow below from a gradient and it stops at equilibrium. Run it from equilibrium and nothing moves at all. A protein is a door, not an engine — it decides whether something can cross, never which way it goes.

Outside90
Inside10
Net flow this step0.00
ATP used0
Press run and watch where it settles.
The three kinds of route
Selectivity is not a size filter

A sodium ion is smaller than a potassium ion, and it still will not go through a potassium channel. If the pore were just a hole, the smaller ion would fit. It is not a hole — it is a structure whose shape and charge suit one ion and not the other.